CR Scientific | Scientific Consulting

Your scientific R&D partner.

From expert advice and independent due diligence to contract research, scientific software, and agentic AI platforms.

We help you decide what to pursue, carry out the research, and build the tools to take it further.

Scientific consulting, connected across three layers Three stacked planes connect document review and presentations, molecular simulations and finite-element calculations, and agentic AI platforms. Each layer informs the others, with scientific review throughout. This is an illustrative schematic. 01Review &communicationDocuments · presentations 02Simulation &modelingMolecules · finite elements 03Agentic AIplatformsConnected tools · human review

How we can help

Scientific advisory

Clarify a difficult problem, compare approaches, and decide what to investigate next.

From a scientific question to a recommendation Define what is worth pursuing, examine the evidence, approaches, and constraints together, and recommend the next step. What is worth pursuing? EvidenceApproachesConstraints Recommend the next step

Technical due diligence

Assess scientific claims, data, models, and code before committing resources.

PATENT EXCERPT · SCHEMATIC

Method for thermal control

“The device achieves through modulation of the optical field, as demonstrated by .”

SCIENTIFIC REVIEW

The bath temperature also changes. Separate its contribution before attributing the effect to optical coupling.

Contract research

Investigate an open question through theory, simulation, and data analysis.

Molecules meet light.

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Slide through the molecular motion.

Recorded simulation: coupling + bath feedback. Read the study

Model details

Applied R&D

Develop and test a proposed solution against physical constraints and practical requirements.

One pocket. Two poses.

MEK1-bound FZC, pose 1: amine contacts to Ser194 and Asn195. Pose 1

Ser194 + Asn195. Switch poses to see the contacts change.

MEK1 inhibitor · Boltz-2 predictions.

Ongoing research

Scientific software

Build tested scientific tools, applications, and prototypes.

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Change the air. Follow the wave to the ground.

Simulated propagation over 500 m.

Model details

Agentic AI platforms

Build platforms that connect agents, scientific tools, and simulations, with human review throughout.

Past clients

The science behind our approach.

Our research connects molecular mechanisms with material properties, reaction rates, and device performance.

Drug discovery & molecular AI

FZC pose 1 in MEK1, with amine contacts to Ser194 and Asn195.
Pose 1
FZC pose 2: the terminal ring rotates 54 degrees, shifting amine contacts toward Ser150 and Asp152 while hinge contacts remain intact.
Pose 2

Boltz-2 · Research in progress

Finding alternative inhibitor poses in MEK1

We developed sampling methods that reveal alternative protein–ligand poses in Boltz-2. For MEK1 bound to the ATP-competitive inhibitor FZC, a terminal ring rotates and changes its contacts within the binding pocket. These model-generated poses provide hypotheses for further investigation and independent physical validation.

Learned electron densities and infrared spectra of polythiophene chains.

DenSNet · Preprint, 2026

Testing molecular models against observable properties

Accurate energies alone do not establish whether a molecular model reproduces measurable behavior. In the DenSNet collaboration, we led evaluations of infrared spectra and transfer to longer polymer chains, testing predictions against experiments and quantum-chemical calculations.

A neural network learns transition probabilities from sampled reaction pathways.

The Journal of Chemical Physics · 2022

Finding pathways for rare molecular events

Important molecular transitions can occur too rarely for ordinary simulations to characterize them efficiently. Working with our collaborators, we combined neural networks with targeted sampling to learn transition probabilities and estimate reaction rates, testing the approach on model systems.

Energy & electrochemistry

Measured and predicted capacitor discharge and impedance curves.

Journal of the Electrochemical Society · 2017

Predicting energy-storage performance

Device characterization becomes more useful when measurements can predict operating behavior. Working with our collaborators, we developed a method that uses impedance data and porous-electrode theory to predict capacitor charge–discharge behavior, connecting electrical measurements to performance modeling.

Ion and solvent clusters sampled from electrolyte simulations.

OMol25 · Preprint, 2025; revised 2026

Representing realistic electrolyte environments

Molecular AI needs training data that capture the environments ions encounter in solution. For OMol25, we worked with Daniel Levine to develop simulations of electrolyte mixtures across compositions and temperatures, supplying molecular configurations for quantum-chemical calculations.

Materials & photonics

Spatially correlated molecular rearrangements in a model of glassy dynamics.

PNAS · 2024

Explaining why disordered materials relax slowly

Understanding slow relaxation requires connecting local molecular motion to behavior over much longer timescales. Together with Kranthi Mandadapu, we developed a theory in which localized rearrangements interact through elastic stresses, explaining how correlated motion and glassy dynamics emerge.

Energy redistribution and structural aging after an optical cavity is activated in molecular simulations.

Nature Communications · Accepted, 2026

Investigating optical control of material aging

Material aging is usually controlled through temperature or pressure. Working with our collaborators, we showed that coupling a model supercooled liquid to an optical cavity could change its structural relaxation while the bath temperature stayed fixed, motivating further research on optical control of disordered materials.

Tell us what you are trying to understand.

We begin with the decision you need to make, the evidence you already have, and the constraints on the work. From there, we propose a focused assessment or computational study, with clear checks for interpreting the results.

Because the work needs to remain useful after an engagement, we document the assumptions, methods, and limitations alongside the code or analysis. You should be able to understand what was established and choose the next step.

A brief description of your question and timeline is enough to start.











CR ScientificIndependent scientific consulting by Muhammad R. Hasyim